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snipar
snipar.errors module
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snipar.errors module
snipar.errors.
count_ME
(
gts
,
pair_indices
)
[source]
snipar.errors.
estimate_genotyping_error_rate
(
ped
,
bedfiles
=
None
,
bgenfiles
=
None
,
min_maf
=
0.01
)
[source]
class
snipar.errors.
g_error
(
error_ests
,
ME
,
sum_het
,
sid
)
[source]
Bases:
object
bayes_shrink
(
alpha
,
beta
)
[source]
snipar.errors.
mendelian_errors
(
ped
,
bedfile
=
None
,
bgenfile
=
None
,
min_maf
=
0.01
)
[source]
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