SNIPar
stable
Contents:
Tutorial
Guide
sibreg.bin package
SNIPar
»
Index
Edit on GitHub
Index
A
|
C
|
D
|
E
|
F
|
G
|
L
|
M
|
O
|
P
|
R
|
S
A
add() (sibreg.sibreg.gtarray method)
alpha_mle() (sibreg.sibreg.model method)
C
compute() (sibreg.sibreg.pgs method)
compute_freqs() (sibreg.sibreg.gtarray method)
compute_info() (sibreg.sibreg.gtarray method)
compute_pgs() (in module sibreg.sibreg)
convert_str_array() (in module sibreg.sibreg)
D
diagonalise() (sibreg.sibreg.gtarray method)
E
encode_str_array() (in module sibreg.sibreg)
F
fill_NAs() (sibreg.sibreg.gtarray method)
filter() (sibreg.sibreg.gtarray method)
filter_ids() (sibreg.sibreg.gtarray method)
filter_info() (sibreg.sibreg.gtarray method)
filter_maf() (sibreg.sibreg.gtarray method)
filter_missingness() (sibreg.sibreg.gtarray method)
find_individuals_with_sibs() (in module sibreg.sibreg)
find_par_gts() (in module sibreg.sibreg)
fit_sibreg_model() (in module sibreg.sibreg)
G
get_fam_means() (in module sibreg.sibreg)
get_gts_matrix() (in module sibreg.sibreg)
get_gts_matrix_given_ped() (in module sibreg.sibreg)
get_gts_matrix_given_ped_bgen() (in module sibreg.sibreg)
get_indices_given_ped() (in module sibreg.sibreg)
gtarray (class in sibreg.sibreg)
L
lik_and_grad() (in module sibreg.sibreg)
likelihood_and_gradient() (sibreg.sibreg.model method)
M
make_gts_matrix() (in module sibreg.sibreg)
make_id_dict() (in module sibreg.sibreg)
match_observed_and_imputed_snps() (in module sibreg.sibreg)
match_observed_and_imputed_snps_bgen() (in module sibreg.sibreg)
match_phenotype() (in module sibreg.sibreg)
mean_normalise() (sibreg.sibreg.gtarray method)
model (class in sibreg.sibreg)
module
sibreg
sibreg.bin
sibreg.sibreg
O
optimize_model() (sibreg.sibreg.model method)
P
pgs (class in sibreg.sibreg)
predict() (sibreg.sibreg.model method)
R
read_covariates() (in module sibreg.sibreg)
read_phenotype() (in module sibreg.sibreg)
S
scale() (sibreg.sibreg.gtarray method)
set_alpha() (sibreg.sibreg.model method)
sibreg
module
sibreg.bin
module
sibreg.sibreg
module
sigma_inv_root() (sibreg.sibreg.model method)
simulate() (in module sibreg.sibreg)
Read the Docs
v: stable
Versions
latest
stable
Downloads
On Read the Docs
Project Home
Builds